Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent deacetylase | SAMN05444679_12461 | Not Available | Negative | 5634831 - 5635553 | 25869.8 |
| hypothetical protein | SAMN05444679_12462 | Not Available | Positive | 5635822 - 5636139 | 11706.0 |
| tpr repeat | SAMN05444679_12463 | Not Available | Negative | 5636559 - 5637224 | 23395.5 |
| tolb amino-terminal domain-containing protein | SAMN05444679_12464 | Not Available | Positive | 5637347 - 5639080 | 62846.0 |
| d-mannose binding lectin | SAMN05444679_12465 | Not Available | Positive | 5639435 - 5640394 | 34543.8 |
| hypothetical protein | SAMN05444679_12466 | Not Available | Positive | 5640407 - 5641525 | 39122.5 |
| ketosteroid isomerase homolog | SAMN05444679_12467 | Not Available | Positive | 5641970 - 5642401 | 15331.1 |
| hypothetical protein | SAMN05444679_12468 | Not Available | Negative | 5642575 - 5643234 | 23729.1 |
| hypothetical protein | SAMN05444679_12469 | Not Available | Negative | 5643651 - 5644124 | 16940.8 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05444679_12470 | Not Available | Positive | 5644592 - 5646295 | 61093.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
