Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12451 | Not Available | Positive | 5626843 - 5627061 | 7873.25 |
| hypothetical protein | SAMN05444679_12452 | Not Available | Positive | 5627245 - 5627637 | 14388.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_12453 | Not Available | Negative | 5628125 - 5629450 | 48174.5 |
| hypothetical protein | SAMN05444679_12454 | Not Available | Positive | 5630102 - 5630413 | 11310.6 |
| ompa family protein | SAMN05444679_12455 | Not Available | Negative | 5630657 - 5631127 | 16738.3 |
| hypothetical protein | SAMN05444679_12456 | Not Available | Negative | 5631813 - 5632250 | 15435.5 |
| eal domain-containing protein | SAMN05444679_12457 | Not Available | Negative | 5632614 - 5633138 | 18940.0 |
| hypothetical protein | SAMN05444679_12458 | Not Available | Positive | 5633181 - 5633471 | 10962.8 |
| hypothetical protein | SAMN05444679_12459 | Not Available | Negative | 5633577 - 5634005 | 15388.2 |
| hypothetical protein | SAMN05444679_12460 | Not Available | Negative | 5634020 - 5634211 | 6845.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
