Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN05444679_12441 | Not Available | Negative | 5614117 - 5614938 | 29784.8 |
| fad/fmn-containing dehydrogenase | SAMN05444679_12442 | Not Available | Positive | 5615145 - 5616674 | 53445.1 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444679_12443 | Not Available | Positive | 5616691 - 5618049 | 49595.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12444 | Not Available | Positive | 5618113 - 5619105 | 34558.3 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN05444679_12445 | Not Available | Positive | 5619176 - 5620036 | 30411.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12446 | Not Available | Positive | 5620081 - 5621061 | 34308.7 |
| biotin/methionine sulfoxide reductase | SAMN05444679_12447 | Not Available | Positive | 5621076 - 5623382 | 83748.5 |
| fmn-dependent nadh-azoreductase | SAMN05444679_12448 | Not Available | Negative | 5624455 - 5625087 | 23375.1 |
| transcriptional regulator, lysr family | SAMN05444679_12449 | Not Available | Positive | 5625205 - 5626131 | 33136.7 |
| acetyltransferase (gnat) family protein | SAMN05444679_12450 | Not Available | Positive | 5626463 - 5626684 | 8287.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
