Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12431 | Not Available | Negative | 5604921 - 5605913 | 34474.7 |
| rhodanese-related sulfurtransferase | SAMN05444679_12432 | Not Available | Negative | 5605954 - 5607594 | 58349.8 |
| hypothetical protein | SAMN05444679_12433 | Not Available | Negative | 5607591 - 5608181 | 21427.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12434 | Not Available | Positive | 5608286 - 5609155 | 31810.9 |
| hypothetical protein | SAMN05444679_12435 | Not Available | Positive | 5609203 - 5609463 | 9923.87 |
| hypothetical protein | SAMN05444679_12436 | Not Available | Positive | 5609643 - 5610284 | 23208.1 |
| transcriptional regulator, arsr family | SAMN05444679_12437 | Not Available | Positive | 5610271 - 5610636 | 13911.7 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444679_12438 | Not Available | Positive | 5610614 - 5611132 | 19328.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_12439 | Not Available | Negative | 5611697 - 5612569 | 31290.2 |
| 2-methylcitrate dehydratase prpd | SAMN05444679_12440 | Not Available | Positive | 5612628 - 5614037 | 49250.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
