Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1241 | Not Available | Negative | 5582949 - 5583656 | 26451.0 |
| ankyrin repeat-containing protein | SAMN05444679_1242 | Not Available | Negative | 5583777 - 5584904 | 40289.4 |
| rhs repeat-associated core domain-containing protein | SAMN05444679_1243 | Not Available | Negative | 5584913 - 5588920 | 148913.0 |
| hypothetical protein | SAMN05444679_1244 | Not Available | Negative | 5588917 - 5590458 | 55345.6 |
| type vi secretion system secreted protein vgrg | SAMN05444679_1245 | Not Available | Negative | 5590466 - 5592655 | 80120.1 |
| filamentous hemagglutinin family n-terminal domain-containing protein | SAMN05444679_1246 | Not Available | Negative | 5592666 - 5597381 | 154932.0 |
| hypothetical protein | SAMN05444679_1247 | Not Available | Negative | 5597461 - 5598057 | 22730.2 |
| hnh endonuclease | SAMN05444679_1248 | Not Available | Negative | 5598054 - 5598617 | 20840.2 |
| Trna-arg | Not Available | Not Available | Positive | 5598807 - 5598882 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 5598894 - 5598968 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
