Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_10253 | Not Available | Negative | 529365 - 530723 | 49618.8 |
| protein of unknown function | SAMN05444679_10254 | Not Available | Negative | 530746 - 532434 | 60139.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_10255 | Not Available | Negative | 532475 - 533242 | 27293.0 |
| benzaldehyde dehydrogenase (nad+) | SAMN05444679_10256 | Not Available | Negative | 533276 - 534751 | 50864.0 |
| regulatory protein, fis family | SAMN05444679_10257 | Not Available | Positive | 535000 - 536841 | 66593.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_10258 | Not Available | Negative | 536883 - 537671 | 27001.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10259 | Not Available | Negative | 537723 - 538691 | 33712.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444679_10260 | Not Available | Negative | 538739 - 539719 | 35332.9 |
| regulator of rnase e activity rraa | SAMN05444679_10261 | Not Available | Negative | 539732 - 540457 | 25533.8 |
| uncharacterized conserved protein glcg, duf336 family | SAMN05444679_10262 | Not Available | Negative | 540466 - 541035 | 19789.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
