Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_123126 | Not Available | Positive | 5573403 - 5574428 | 36251.6 |
| arac-type dna-binding protein | SAMN05444679_123127 | Not Available | Positive | 5574445 - 5574903 | 16666.1 |
| hypothetical protein | SAMN05444679_123128 | Not Available | Positive | 5574900 - 5575328 | 15905.0 |
| pyruvate, water dikinase | SAMN05444679_123129 | Not Available | Negative | 5575403 - 5576263 | 30482.2 |
| pyruvate, water dikinase | SAMN05444679_123130 | Not Available | Negative | 5576279 - 5577973 | 61232.8 |
| transcriptional regulator, tetr family | SAMN05444679_123131 | Not Available | Negative | 5577957 - 5578586 | 23970.7 |
| hypothetical protein | SAMN05444679_123132 | Not Available | Negative | 5579820 - 5579978 | 6565.86 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444679_123133 | Not Available | Positive | 5580651 - 5581526 | 32409.3 |
| protein of unknown function | SAMN05444679_123134 | Not Available | Negative | 5581778 - 5582275 | 18202.9 |
| pin domain-containing protein | SAMN05444679_123135 | Not Available | Positive | 5582551 - 5582658 | 3689.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
