Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase | SAMN05444679_123116 | Not Available | Negative | 5563113 - 5564390 | 45876.0 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_123117 | Not Available | Negative | 5564390 - 5565196 | 28778.2 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_123118 | Not Available | Negative | 5565203 - 5566114 | 32747.0 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444679_123119 | Not Available | Negative | 5566111 - 5567226 | 40244.5 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444679_123120 | Not Available | Negative | 5567234 - 5568271 | 37808.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_123121 | Not Available | Negative | 5568428 - 5569321 | 32673.9 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN05444679_123122 | Not Available | Positive | 5569440 - 5569751 | 11174.5 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN05444679_123123 | Not Available | Positive | 5569733 - 5571124 | 49177.5 |
| sarcosine oxidase subunit beta | SAMN05444679_123124 | Not Available | Positive | 5571117 - 5572298 | 42086.9 |
| membrane dipeptidase | SAMN05444679_123125 | Not Available | Positive | 5572328 - 5573371 | 37903.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
