Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_123106 | Not Available | Positive | 5551934 - 5552929 | 34945.3 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444679_123107 | Not Available | Positive | 5552926 - 5553546 | 22862.4 |
| hypothetical protein | SAMN05444679_123108 | Not Available | Positive | 5553649 - 5554101 | 16623.8 |
| conserved hypothetical protein | SAMN05444679_123109 | Not Available | Positive | 5554291 - 5554770 | 17544.7 |
| hypothetical protein | SAMN05444679_123110 | Not Available | Positive | 5555009 - 5555350 | 12838.2 |
| ahpc/tsa family protein | SAMN05444679_123111 | Not Available | Positive | 5555526 - 5556206 | 24252.1 |
| tolb amino-terminal domain-containing protein | SAMN05444679_123112 | Not Available | Positive | 5556959 - 5559118 | 78254.3 |
| glutathione s-transferase | SAMN05444679_123113 | Not Available | Negative | 5559138 - 5559812 | 25016.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_123114 | Not Available | Negative | 5559828 - 5560940 | 40201.0 |
| tolb amino-terminal domain-containing protein | SAMN05444679_123115 | Not Available | Positive | 5561104 - 5562921 | 67213.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
