Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12396 | Not Available | Negative | 5542880 - 5543233 | 13105.8 |
| site-specific recombinase xerd | SAMN05444679_12397 | Not Available | Positive | 5543352 - 5544377 | 37873.0 |
| dna-binding protein h-ns | SAMN05444679_12398 | Not Available | Positive | 5544506 - 5545039 | 18924.6 |
| hypothetical protein | SAMN05444679_12399 | Not Available | Negative | 5545165 - 5545308 | 5638.89 |
| hypothetical protein | SAMN05444679_123100 | Not Available | Negative | 5545295 - 5545642 | 13106.8 |
| parb/repb/spo0j family partition protein | SAMN05444679_123101 | Not Available | Negative | 5545684 - 5546388 | 25341.1 |
| transcriptional regulator, tetr family | SAMN05444679_123102 | Not Available | Positive | 5547136 - 5547813 | 24673.7 |
| hypothetical protein | SAMN05444679_123103 | Not Available | Positive | 5547848 - 5549158 | 47807.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_123104 | Not Available | Positive | 5549169 - 5550011 | 28769.4 |
| fatty-acyl-coa synthase | SAMN05444679_123105 | Not Available | Positive | 5550037 - 5551914 | 65977.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
