Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, contains tandem act domains | SAMN05444679_12376 | Not Available | Positive | 5523193 - 5523615 | 15086.1 |
| ribbon-helix-helix protein, copg family | SAMN05444679_12377 | Not Available | Negative | 5524476 - 5524673 | 7336.95 |
| hypothetical protein | SAMN05444679_12378 | Not Available | Positive | 5524904 - 5525116 | 7682.62 |
| proton-conducting membrane transporter | SAMN05444679_12379 | Not Available | Positive | 5525534 - 5525977 | 15943.6 |
| hypothetical protein | SAMN05444679_12380 | Not Available | Positive | 5526173 - 5526958 | 28640.5 |
| spermidine synthase | SAMN05444679_12381 | Not Available | Positive | 5527005 - 5527760 | 27916.3 |
| hypothetical protein | SAMN05444679_12382 | Not Available | Positive | 5527833 - 5528111 | 10452.6 |
| formate hydrogenlyase subunit 3/multisubunit na+/h+ antiporter, mnhd subunit | SAMN05444679_12383 | Not Available | Positive | 5528120 - 5530135 | 73008.4 |
| formate hydrogenlyase subunit 4 | SAMN05444679_12384 | Not Available | Positive | 5530143 - 5531090 | 34131.9 |
| hydrogenase-4 component e | SAMN05444679_12385 | Not Available | Positive | 5531092 - 5531754 | 23943.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
