Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12366 | Not Available | Positive | 5510356 - 5510514 | 5387.84 |
| alcohol dehydrogenase groes-like domain-containing protein | SAMN05444679_12367 | Not Available | Positive | 5511363 - 5511665 | 10556.0 |
| plasma-membrane calcium-translocating p-type atpase | SAMN05444679_12368 | Not Available | Positive | 5511670 - 5514462 | 98423.7 |
| rnd family efflux transporter, mfp subunit | SAMN05444679_12369 | Not Available | Positive | 5514736 - 5515788 | 37641.4 |
| lipoprotein-releasing system permease protein | SAMN05444679_12370 | Not Available | Positive | 5515793 - 5517037 | 44688.0 |
| lipoprotein-releasing system atp-binding protein | SAMN05444679_12371 | Not Available | Positive | 5517034 - 5517744 | 25806.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_12372 | Not Available | Negative | 5518441 - 5518890 | 15976.4 |
| predicted membrane protein | SAMN05444679_12373 | Not Available | Positive | 5519087 - 5520598 | 56601.1 |
| hypothetical protein | SAMN05444679_12374 | Not Available | Negative | 5520690 - 5520881 | 6995.55 |
| acetyl-coenzyme a synthetase | SAMN05444679_12375 | Not Available | Negative | 5520999 - 5523056 | 76571.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
