Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12356 | Not Available | Negative | 5502111 - 5502362 | 9093.07 |
| hypothetical protein | SAMN05444679_12357 | Not Available | Negative | 5502362 - 5502637 | 10195.5 |
| cytochrome c oxidase accessory protein fixg | SAMN05444679_12358 | Not Available | Negative | 5502658 - 5504097 | 53948.9 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05444679_12359 | Not Available | Negative | 5504107 - 5505021 | 32415.7 |
| cytochrome c oxidase cbb3-type subunit 4 | SAMN05444679_12360 | Not Available | Negative | 5505031 - 5505168 | 5047.13 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN05444679_12361 | Not Available | Negative | 5505179 - 5505805 | 23073.8 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05444679_12362 | Not Available | Negative | 5505817 - 5507256 | 53135.9 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05444679_12363 | Not Available | Negative | 5507322 - 5507459 | 5144.33 |
| cu2+-exporting atpase | SAMN05444679_12364 | Not Available | Negative | 5507459 - 5509744 | 80863.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_12365 | Not Available | Positive | 5509896 - 5510339 | 15631.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
