Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein family protein | SAMN05444679_12346 | Not Available | Positive | 5490830 - 5491663 | 29790.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444679_12347 | Not Available | Positive | 5491868 - 5492479 | 22481.3 |
| pas domain s-box-containing protein | SAMN05444679_12348 | Not Available | Positive | 5492479 - 5494527 | 72941.5 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05444679_12349 | Not Available | Negative | 5494521 - 5495252 | 26738.4 |
| aspartate/ornithine carbamoyltransferase, carbamoyl-p binding domain | SAMN05444679_12350 | Not Available | Positive | 5495409 - 5496191 | 27837.7 |
| acetyltransferase | SAMN05444679_12351 | Not Available | Positive | 5496344 - 5499049 | 96210.7 |
| protein of unknown function | SAMN05444679_12352 | Not Available | Positive | 5499119 - 5499334 | 7268.03 |
| hypothetical protein | SAMN05444679_12353 | Not Available | Positive | 5499370 - 5499462 | 3356.41 |
| hypothetical protein | SAMN05444679_12354 | Not Available | Negative | 5500489 - 5501202 | 24254.3 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05444679_12355 | Not Available | Positive | 5501414 - 5502130 | 27004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
