Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | SAMN05444679_10243 | Not Available | Positive | 519568 - 520488 | 31054.4 |
| hypothetical protein | SAMN05444679_10244 | Not Available | Negative | 520533 - 520664 | 5166.44 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05444679_10245 | Not Available | Negative | 520707 - 521699 | 36917.1 |
| enoyl-coa hydratase | SAMN05444679_10246 | Not Available | Positive | 521847 - 522620 | 28788.4 |
| gst-like protein | SAMN05444679_10247 | Not Available | Positive | 522630 - 523313 | 25919.2 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444679_10248 | Not Available | Positive | 523316 - 523936 | 23747.2 |
| hypothetical protein | SAMN05444679_10249 | Not Available | Positive | 523938 - 524795 | 31853.7 |
| acetyl esterase | SAMN05444679_10250 | Not Available | Negative | 524817 - 525827 | 35651.8 |
| hypothetical protein | SAMN05444679_10251 | Not Available | Negative | 525836 - 528253 | 86965.8 |
| bnr/asp-box repeat-containing protein | SAMN05444679_10252 | Not Available | Negative | 528277 - 529365 | 37149.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
