Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-550 pedf | SAMN05444679_12326 | Not Available | Negative | 5470870 - 5471397 | 19067.8 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN05444679_12327 | Not Available | Positive | 5471691 - 5473808 | 76146.7 |
| pyrroloquinoline quinone biosynthesis protein b | SAMN05444679_12328 | Not Available | Positive | 5474210 - 5475142 | 33978.8 |
| pyrroloquinoline-quinone synthase | SAMN05444679_12329 | Not Available | Positive | 5475139 - 5475915 | 29773.9 |
| pyrroloquinoline quinone biosynthesis protein d | SAMN05444679_12330 | Not Available | Positive | 5475912 - 5476166 | 9395.35 |
| pyrroloquinoline quinone biosynthesis protein e | SAMN05444679_12331 | Not Available | Positive | 5476175 - 5477377 | 44053.6 |
| abc-2 type transport system atp-binding protein | SAMN05444679_12332 | Not Available | Positive | 5477371 - 5478084 | 25389.8 |
| pqq-dependent catabolism-associated beta-propeller protein | SAMN05444679_12333 | Not Available | Positive | 5478096 - 5479085 | 35111.6 |
| abc-2 type transport system permease protein | SAMN05444679_12334 | Not Available | Positive | 5479129 - 5479920 | 29044.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12335 | Not Available | Positive | 5479917 - 5480903 | 34911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
