Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/proline symporter | SAMN05444679_12316 | Not Available | Positive | 5459342 - 5462116 | 100204.0 |
| two-component system, ompr family, response regulator rsta/two-component system, ompr family, response regulator baer/two-component system, narl family, response regulator evga | SAMN05444679_12317 | Not Available | Positive | 5462119 - 5462493 | 13557.7 |
| dna polymerase-3 subunit epsilon | SAMN05444679_12318 | Not Available | Positive | 5462490 - 5464670 | 78475.4 |
| hypothetical protein | SAMN05444679_12319 | Not Available | Negative | 5465067 - 5465204 | 4468.58 |
| hypothetical protein | SAMN05444679_12320 | Not Available | Negative | 5465373 - 5465621 | 9282.12 |
| hypothetical protein | SAMN05444679_12321 | Not Available | Positive | 5465789 - 5466349 | 20993.1 |
| nitroreductase family protein | SAMN05444679_12322 | Not Available | Negative | 5466455 - 5467618 | 42669.6 |
| aldehyde dehydrogenase | SAMN05444679_12323 | Not Available | Positive | 5468047 - 5469567 | 55618.9 |
| hypothetical protein | SAMN05444679_12324 | Not Available | Positive | 5469570 - 5469950 | 13697.3 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_12325 | Not Available | Negative | 5470005 - 5470856 | 30746.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
