Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf302 family | SAMN05444679_1236 | Not Available | Positive | 5450055 - 5450447 | 14211.3 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_1237 | Not Available | Positive | 5450556 - 5451011 | 16329.9 |
| serine protease do | SAMN05444679_1238 | Not Available | Positive | 5451174 - 5452487 | 46635.1 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05444679_1239 | Not Available | Negative | 5452494 - 5453078 | 21275.2 |
| hypothetical protein | SAMN05444679_12310 | Not Available | Negative | 5453102 - 5453458 | 12862.2 |
| acetyl-coenzyme a synthetase | SAMN05444679_12311 | Not Available | Negative | 5453478 - 5455454 | 71592.4 |
| uncharacterized membrane protein, duf485 family | SAMN05444679_12312 | Not Available | Positive | 5455592 - 5455900 | 11357.1 |
| cation/acetate symporter | SAMN05444679_12313 | Not Available | Positive | 5455897 - 5457624 | 59888.0 |
| cbs domain-containing protein | SAMN05444679_12314 | Not Available | Positive | 5457694 - 5459124 | 52973.3 |
| hypothetical protein | SAMN05444679_12315 | Not Available | Positive | 5459140 - 5459340 | 7322.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
