Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein b | SAMN05444679_122119 | Not Available | Negative | 5441815 - 5442735 | 32841.4 |
| prolyl aminopeptidase serine peptidase. merops family s33 | SAMN05444679_122120 | Not Available | Positive | 5443008 - 5444045 | 37450.9 |
| two-component system, narl family, sensor histidine kinase uhpb | SAMN05444679_122121 | Not Available | Positive | 5444050 - 5445429 | 50258.0 |
| two component transcriptional regulator, luxr family | SAMN05444679_122122 | Not Available | Positive | 5445426 - 5446073 | 23287.3 |
| hypothetical protein | SAMN05444679_122123 | Not Available | Negative | 5446374 - 5446490 | 3899.66 |
| dde superfamily endonuclease | SAMN05444679_1231 | Not Available | Positive | 5446491 - 5446751 | 10319.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_1232 | Not Available | Negative | 5447176 - 5447805 | 22159.6 |
| universal stress protein family protein | SAMN05444679_1233 | Not Available | Negative | 5447914 - 5448756 | 30004.5 |
| hypothetical protein | SAMN05444679_1234 | Not Available | Positive | 5449016 - 5449351 | 12189.9 |
| hypothetical protein | SAMN05444679_1235 | Not Available | Positive | 5449465 - 5450079 | 22032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
