Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mxak protein | SAMN05444679_122109 | Not Available | Positive | 5434869 - 5435420 | 19980.1 |
| mxal protein | SAMN05444679_122110 | Not Available | Positive | 5435417 - 5436382 | 35192.4 |
| hypothetical protein | SAMN05444679_122111 | Not Available | Negative | 5436483 - 5436587 | 3819.53 |
| transcriptional regulator, arsr family | SAMN05444679_122112 | Not Available | Positive | 5436988 - 5437317 | 12214.8 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444679_122113 | Not Available | Positive | 5437314 - 5437778 | 17135.4 |
| uncharacterized conserved protein | SAMN05444679_122114 | Not Available | Positive | 5437819 - 5438232 | 14824.8 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444679_122115 | Not Available | Positive | 5438487 - 5439299 | 29313.6 |
| pyrroloquinoline quinone biosynthesis protein e | SAMN05444679_122116 | Not Available | Negative | 5439598 - 5440743 | 42732.1 |
| pyrroloquinoline quinone biosynthesis protein d | SAMN05444679_122117 | Not Available | Negative | 5440740 - 5441030 | 10761.8 |
| pyrroloquinoline-quinone synthase | SAMN05444679_122118 | Not Available | Negative | 5441027 - 5441791 | 29194.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
