Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444679_12299 | Not Available | Positive | 5427052 - 5427456 | 14726.9 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_122100 | Not Available | Positive | 5427453 - 5428343 | 32535.6 |
| hypothetical protein | SAMN05444679_122101 | Not Available | Positive | 5428372 - 5429055 | 24829.1 |
| hypothetical protein | SAMN05444679_122102 | Not Available | Positive | 5429085 - 5429453 | 13261.2 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN05444679_122103 | Not Available | Positive | 5429526 - 5430461 | 32697.8 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05444679_122104 | Not Available | Positive | 5430506 - 5431051 | 19285.8 |
| moxr-like atpase | SAMN05444679_122105 | Not Available | Positive | 5431075 - 5432094 | 38216.1 |
| protein of unknown function duf58 | SAMN05444679_122106 | Not Available | Positive | 5432110 - 5432982 | 32635.1 |
| mxaa protein | SAMN05444679_122107 | Not Available | Positive | 5432979 - 5433863 | 32180.9 |
| mxac protein | SAMN05444679_122108 | Not Available | Positive | 5433871 - 5434872 | 36418.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
