Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose 1,5-bisphosphate carboxylase small subunit | SAMN05444679_12289 | Not Available | Negative | 5414458 - 5414877 | 16008.0 |
| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | SAMN05444679_12290 | Not Available | Negative | 5414902 - 5416368 | 53762.1 |
| transcriptional regulator, lysr family | SAMN05444679_12291 | Not Available | Positive | 5416488 - 5417462 | 35149.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN05444679_12292 | Not Available | Negative | 5417477 - 5419771 | 82946.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12293 | Not Available | Negative | 5419788 - 5420783 | 35735.5 |
| abc-2 type transport system permease protein | SAMN05444679_12294 | Not Available | Negative | 5420842 - 5421720 | 31931.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_12295 | Not Available | Negative | 5421702 - 5422880 | 41324.6 |
| pqq-dependent catabolism-associated beta-propeller protein | SAMN05444679_12296 | Not Available | Negative | 5422877 - 5423872 | 34918.2 |
| abc-2 type transport system atp-binding protein | SAMN05444679_12297 | Not Available | Negative | 5423910 - 5424623 | 25767.2 |
| pqq-dependent dehydrogenase, methanol/ethanol family | SAMN05444679_12298 | Not Available | Positive | 5425123 - 5426952 | 66324.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
