Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl protease | SAMN05444679_12279 | Not Available | Positive | 5404813 - 5405436 | 21696.1 |
| hypothetical protein | SAMN05444679_12280 | Not Available | Positive | 5405963 - 5406229 | 9757.38 |
| fructose-bisphosphate aldolase | SAMN05444679_12281 | Not Available | Negative | 5406233 - 5407255 | 36780.2 |
| transketolase | SAMN05444679_12282 | Not Available | Negative | 5407318 - 5409354 | 72631.6 |
| phosphoribulokinase | SAMN05444679_12283 | Not Available | Negative | 5409365 - 5410243 | 33009.5 |
| d-fructose 1,6-bisphosphatase | SAMN05444679_12284 | Not Available | Negative | 5410277 - 5411350 | 39022.6 |
| phosphoglycolate phosphatase | SAMN05444679_12285 | Not Available | Negative | 5411366 - 5412076 | 24715.8 |
| ribulose-phosphate 3-epimerase | SAMN05444679_12286 | Not Available | Negative | 5412073 - 5412783 | 24967.3 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444679_12287 | Not Available | Negative | 5412785 - 5413537 | 26947.2 |
| probable rubsico expression protein cbbx | SAMN05444679_12288 | Not Available | Negative | 5413534 - 5414442 | 33888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
