Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized short protein ybdd, duf466 family | SAMN05444679_12269 | Not Available | Positive | 5396231 - 5396446 | 8057.62 |
| hypothetical protein | SAMN05444679_12270 | Not Available | Negative | 5396460 - 5397383 | 31703.2 |
| upf0755 protein | SAMN05444679_12271 | Not Available | Positive | 5397469 - 5398467 | 36601.8 |
| dtmp kinase | SAMN05444679_12272 | Not Available | Positive | 5398464 - 5399087 | 22720.3 |
| dna polymerase-3 subunit delta' | SAMN05444679_12273 | Not Available | Positive | 5399084 - 5400103 | 36360.8 |
| type iv pilus assembly protein pilz | SAMN05444679_12274 | Not Available | Positive | 5400100 - 5400474 | 13326.0 |
| tatd dnase family protein | SAMN05444679_12275 | Not Available | Positive | 5400540 - 5401346 | 29765.4 |
| hypothetical protein | SAMN05444679_12276 | Not Available | Positive | 5401343 - 5402005 | 24118.8 |
| site-specific recombinase xerd | SAMN05444679_12277 | Not Available | Positive | 5402181 - 5403059 | 32925.4 |
| transposase zinc-binding domain-containing protein | SAMN05444679_12278 | Not Available | Positive | 5403172 - 5404266 | 41208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
