Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN05444679_10233 | Not Available | Positive | 508480 - 510561 | 76793.5 |
| transcriptional regulator, gntr family | SAMN05444679_10234 | Not Available | Negative | 510876 - 511559 | 24595.2 |
| fad/fmn-containing dehydrogenase | SAMN05444679_10235 | Not Available | Positive | 511704 - 513119 | 49924.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_10236 | Not Available | Positive | 513122 - 513667 | 19998.7 |
| trap transporter, dctm subunit | SAMN05444679_10237 | Not Available | Positive | 513664 - 514941 | 44360.0 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_10238 | Not Available | Positive | 514968 - 515987 | 37479.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444679_10239 | Not Available | Positive | 516004 - 516783 | 27392.1 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN05444679_10240 | Not Available | Positive | 516780 - 517580 | 27527.4 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05444679_10241 | Not Available | Positive | 517582 - 518445 | 30308.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_10242 | Not Available | Positive | 518646 - 519563 | 32387.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
