Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12249 | Not Available | Positive | 5372004 - 5372990 | 34500.6 |
| beta-lactamase class a | SAMN05444679_12250 | Not Available | Negative | 5373000 - 5373878 | 30966.0 |
| transcriptional regulator, lysr family | SAMN05444679_12251 | Not Available | Positive | 5373964 - 5374836 | 31529.4 |
| outer membrane autotransporter barrel domain-containing protein | SAMN05444679_12252 | Not Available | Positive | 5374896 - 5379161 | 141114.0 |
| hypothetical protein | SAMN05444679_12253 | Not Available | Negative | 5379336 - 5380121 | 26944.0 |
| 4-hydroxybutyrate dehydrogenase | SAMN05444679_12254 | Not Available | Negative | 5380214 - 5381350 | 39796.1 |
| acetyl esterase | SAMN05444679_12255 | Not Available | Positive | 5381409 - 5382359 | 33879.5 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | SAMN05444679_12256 | Not Available | Positive | 5382367 - 5383242 | 32646.0 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_12257 | Not Available | Negative | 5383253 - 5383957 | 25036.0 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_12258 | Not Available | Negative | 5383971 - 5384687 | 26280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
