Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN05444679_12229 | Not Available | Positive | 5350639 - 5352243 | 54746.4 |
| hypothetical protein | SAMN05444679_12230 | Not Available | Positive | 5352391 - 5354916 | 93211.5 |
| choline dehydrogenase | SAMN05444679_12231 | Not Available | Positive | 5354937 - 5356808 | 68434.4 |
| hypothetical protein | SAMN05444679_12232 | Not Available | Positive | 5356870 - 5357301 | 16175.5 |
| hypothetical protein | SAMN05444679_12233 | Not Available | Positive | 5357336 - 5358613 | 48310.0 |
| dyp-type peroxidase family | SAMN05444679_12234 | Not Available | Positive | 5358610 - 5360043 | 52364.9 |
| hypothetical protein | SAMN05444679_12235 | Not Available | Positive | 5360040 - 5361266 | 46552.0 |
| conserved hypothetical protein | SAMN05444679_12236 | Not Available | Negative | 5361271 - 5361789 | 19639.7 |
| hypothetical protein | SAMN05444679_12237 | Not Available | Positive | 5361936 - 5362085 | 5040.35 |
| glutathione s-transferase | SAMN05444679_12238 | Not Available | Negative | 5362221 - 5362928 | 25989.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
