Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible protein a | SAMN05444679_12219 | Not Available | Positive | 5339273 - 5339950 | 24571.4 |
| paraquat-inducible protein b | SAMN05444679_12220 | Not Available | Positive | 5340008 - 5341639 | 59146.1 |
| hypothetical protein | SAMN05444679_12221 | Not Available | Positive | 5341636 - 5342238 | 20729.6 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN05444679_12222 | Not Available | Positive | 5342240 - 5342782 | 18951.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05444679_12223 | Not Available | Positive | 5342936 - 5344102 | 42574.0 |
| glycosyl transferase family 2 | SAMN05444679_12224 | Not Available | Positive | 5344096 - 5345046 | 35601.5 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05444679_12225 | Not Available | Positive | 5345121 - 5346326 | 41563.2 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444679_12226 | Not Available | Positive | 5346313 - 5347746 | 49065.4 |
| transcriptional regulator, gntr family | SAMN05444679_12227 | Not Available | Negative | 5347763 - 5349211 | 52457.9 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN05444679_12228 | Not Available | Positive | 5349254 - 5350642 | 50022.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
