Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | SAMN05444679_1229 | Not Available | Positive | 5325378 - 5326451 | 39409.9 |
| d-amino-acid dehydrogenase | SAMN05444679_12210 | Not Available | Positive | 5326448 - 5328235 | 64270.1 |
| amino acid adenylation domain-containing protein | SAMN05444679_12211 | Not Available | Positive | 5328232 - 5331243 | 108214.0 |
| threonine/homoserine efflux transporter rhta | SAMN05444679_12212 | Not Available | Positive | 5331236 - 5332174 | 31858.8 |
| fad-nad(p)-binding | SAMN05444679_12213 | Not Available | Positive | 5332171 - 5333976 | 64266.4 |
| transcriptional regulator, luxr family | SAMN05444679_12214 | Not Available | Positive | 5334118 - 5335059 | 34952.5 |
| predicted oxidoreductase | SAMN05444679_12215 | Not Available | Negative | 5335065 - 5336096 | 37132.2 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05444679_12216 | Not Available | Negative | 5336126 - 5337313 | 40028.4 |
| transcriptional regulator, lysr family | SAMN05444679_12217 | Not Available | Positive | 5337736 - 5338656 | 33863.0 |
| paraquat-inducible protein a | SAMN05444679_12218 | Not Available | Positive | 5338653 - 5339276 | 22507.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
