Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dioxygenase | SAMN05444679_121141 | Not Available | Negative | 5304379 - 5305200 | 28992.5 |
| outer membrane protein assembly complex, yaet protein | SAMN05444679_121142 | Not Available | Negative | 5305230 - 5306456 | 44375.8 |
| type iii secretion protein u | SAMN05444679_1221 | Not Available | Positive | 5306565 - 5307605 | 38270.6 |
| lysm domain-containing protein | SAMN05444679_1222 | Not Available | Positive | 5307647 - 5318644 | 389360.0 |
| arac-type dna-binding protein | SAMN05444679_1223 | Not Available | Negative | 5318661 - 5319557 | 33126.3 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_1224 | Not Available | Positive | 5319785 - 5321362 | 57311.5 |
| hypothetical protein | SAMN05444679_1225 | Not Available | Positive | 5321375 - 5322385 | 36236.8 |
| peptide/nickel transport system permease protein | SAMN05444679_1226 | Not Available | Positive | 5322405 - 5323382 | 35043.3 |
| peptide/nickel transport system permease protein | SAMN05444679_1227 | Not Available | Positive | 5323423 - 5324385 | 33835.2 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_1228 | Not Available | Positive | 5324382 - 5325374 | 34927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
