Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | SAMN05444679_121121 | Not Available | Positive | 5288496 - 5289281 | 29576.4 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_121122 | Not Available | Positive | 5289307 - 5290491 | 41255.7 |
| hypothetical protein | SAMN05444679_121123 | Not Available | Negative | 5290481 - 5290789 | 11675.0 |
| snoal-like domain-containing protein | SAMN05444679_121124 | Not Available | Negative | 5290786 - 5291271 | 18075.3 |
| nicotinamide-nucleotide amidase | SAMN05444679_121125 | Not Available | Negative | 5291288 - 5291785 | 17025.2 |
| phosphatidylglycerophosphatase | SAMN05444679_121126 | Not Available | Negative | 5291794 - 5292327 | 19436.1 |
| hypothetical protein | SAMN05444679_121127 | Not Available | Negative | 5292432 - 5292707 | 9950.77 |
| two component transcriptional regulator, luxr family | SAMN05444679_121128 | Not Available | Positive | 5292855 - 5293478 | 22059.2 |
| signal transduction histidine kinase | SAMN05444679_121129 | Not Available | Positive | 5293478 - 5295283 | 64713.6 |
| hd-like signal output (hdod) domain, no enzymatic activity | SAMN05444679_121130 | Not Available | Negative | 5295332 - 5296168 | 30495.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
