Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_121111 | Not Available | Positive | 5275062 - 5275325 | 9823.33 |
| hypothetical protein | SAMN05444679_121112 | Not Available | Negative | 5275322 - 5275699 | 13710.6 |
| cbs domain-containing protein | SAMN05444679_121113 | Not Available | Negative | 5275739 - 5276167 | 16114.8 |
| hypothetical protein | SAMN05444679_121114 | Not Available | Positive | 5276354 - 5276761 | 14573.2 |
| papain family cysteine protease | SAMN05444679_121115 | Not Available | Positive | 5276773 - 5277666 | 32279.6 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN05444679_121116 | Not Available | Positive | 5277707 - 5278108 | 14255.3 |
| vcbs repeat-containing protein | SAMN05444679_121117 | Not Available | Positive | 5278327 - 5284332 | 195611.0 |
| atp-binding cassette, subfamily c, eexd | SAMN05444679_121118 | Not Available | Positive | 5284365 - 5286077 | 61079.3 |
| hlyd family secretion protein | SAMN05444679_121119 | Not Available | Positive | 5286074 - 5287411 | 49527.2 |
| hypothetical protein | SAMN05444679_121120 | Not Available | Negative | 5287437 - 5288327 | 31990.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
