Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyisoprenoid-binding protein ycei | SAMN05444679_121101 | Not Available | Negative | 5267294 - 5267923 | 22567.2 |
| polyisoprenoid-binding protein ycei | SAMN05444679_121102 | Not Available | Negative | 5267969 - 5268556 | 20620.9 |
| cytochrome b561 | SAMN05444679_121103 | Not Available | Negative | 5268553 - 5269161 | 22341.8 |
| hypothetical protein | SAMN05444679_121104 | Not Available | Negative | 5269190 - 5269312 | 4460.59 |
| hypothetical protein | SAMN05444679_121105 | Not Available | Negative | 5269315 - 5269608 | 10263.3 |
| signal transduction histidine kinase | SAMN05444679_121106 | Not Available | Negative | 5269741 - 5271600 | 68655.5 |
| two component transcriptional regulator, luxr family | SAMN05444679_121107 | Not Available | Negative | 5271600 - 5272259 | 23413.3 |
| putative n6-adenine-specific dna methylase | SAMN05444679_121108 | Not Available | Positive | 5272338 - 5273597 | 45982.8 |
| haloacetate dehalogenase | SAMN05444679_121109 | Not Available | Negative | 5273611 - 5274561 | 34497.9 |
| hypothetical protein | SAMN05444679_121110 | Not Available | Negative | 5274573 - 5274770 | 7320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
