Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase | SAMN05444679_10223 | Not Available | Negative | 496267 - 497292 | 36359.2 |
| adenylate cyclase, class 3 | SAMN05444679_10224 | Not Available | Negative | 497289 - 499253 | 72282.8 |
| bacterioferritin | SAMN05444679_10225 | Not Available | Positive | 499744 - 500211 | 17364.8 |
| protein of unknown function | SAMN05444679_10226 | Not Available | Positive | 500612 - 501670 | 38398.6 |
| regulatory helix-turn-helix protein, lysr family | SAMN05444679_10227 | Not Available | Positive | 501775 - 501963 | 6616.83 |
| lysr substrate binding domain-containing protein | SAMN05444679_10228 | Not Available | Positive | 502384 - 502707 | 11190.7 |
| hypothetical protein | SAMN05444679_10229 | Not Available | Positive | 503144 - 503359 | 7516.13 |
| hypothetical protein | SAMN05444679_10230 | Not Available | Positive | 503402 - 503608 | 7720.87 |
| electron transfer dm13 | SAMN05444679_10231 | Not Available | Positive | 503857 - 504327 | 16843.4 |
| subtilase family protein | SAMN05444679_10232 | Not Available | Negative | 505623 - 507848 | 79779.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
