Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| psif repeat-containing protein | SAMN05444679_12191 | Not Available | Negative | 5257330 - 5257626 | 10475.9 |
| arginyl-trna synthetase | SAMN05444679_12192 | Not Available | Positive | 5257755 - 5259428 | 61152.4 |
| cell division protein ftsn | SAMN05444679_12193 | Not Available | Positive | 5259438 - 5260166 | 25224.0 |
| thiol:disulfide interchange protein dsba | SAMN05444679_12194 | Not Available | Positive | 5260251 - 5260895 | 23881.6 |
| lipopolysaccharide export system protein lpta | SAMN05444679_12195 | Not Available | Positive | 5261022 - 5261714 | 24260.7 |
| lipopolysaccharide export system atp-binding protein | SAMN05444679_12196 | Not Available | Positive | 5261711 - 5262487 | 28447.5 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN05444679_12197 | Not Available | Positive | 5262502 - 5264082 | 58005.5 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | SAMN05444679_12198 | Not Available | Positive | 5264085 - 5265689 | 59444.8 |
| hypothetical protein | SAMN05444679_12199 | Not Available | Negative | 5265696 - 5266076 | 14963.3 |
| hypothetical protein | SAMN05444679_121100 | Not Available | Positive | 5266243 - 5267313 | 38880.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
