Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase, fe-mn family | SAMN05444679_12181 | Not Available | Negative | 5243487 - 5244119 | 22489.6 |
| chromate transporter | SAMN05444679_12182 | Not Available | Negative | 5244130 - 5245503 | 48352.0 |
| hypothetical protein | SAMN05444679_12183 | Not Available | Negative | 5245500 - 5246456 | 34771.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12184 | Not Available | Positive | 5246542 - 5247477 | 34104.0 |
| putative membrane protein | SAMN05444679_12185 | Not Available | Positive | 5247498 - 5247956 | 17035.5 |
| hypothetical protein | SAMN05444679_12186 | Not Available | Positive | 5247963 - 5250002 | 74419.0 |
| hypothetical protein | SAMN05444679_12187 | Not Available | Positive | 5250026 - 5252095 | 75343.8 |
| hemolysin activation/secretion protein | SAMN05444679_12188 | Not Available | Positive | 5252262 - 5253857 | 56664.1 |
| filamentous hemagglutinin family n-terminal domain-containing protein | SAMN05444679_12189 | Not Available | Positive | 5253880 - 5256438 | 84325.1 |
| hypothetical protein | SAMN05444679_12190 | Not Available | Positive | 5256451 - 5257263 | 27548.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
