Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12171 | Not Available | Positive | 5233735 - 5233953 | 8274.97 |
| hypothetical protein | SAMN05444679_12172 | Not Available | Positive | 5233955 - 5234728 | 29840.6 |
| malate synthase | SAMN05444679_12173 | Not Available | Negative | 5234739 - 5236916 | 77918.4 |
| histidinol-phosphate aminotransferase | SAMN05444679_12174 | Not Available | Positive | 5237121 - 5238116 | 35189.0 |
| transcriptional regulator, iclr family | SAMN05444679_12175 | Not Available | Negative | 5238141 - 5238881 | 26767.0 |
| hydroxymethylglutaryl-coa lyase | SAMN05444679_12176 | Not Available | Positive | 5238986 - 5239918 | 32555.4 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_12177 | Not Available | Positive | 5239911 - 5241104 | 43255.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12178 | Not Available | Positive | 5241109 - 5242080 | 33491.5 |
| gluconolactonase | SAMN05444679_12179 | Not Available | Positive | 5242088 - 5243011 | 33055.3 |
| hypothetical protein | SAMN05444679_12180 | Not Available | Negative | 5243032 - 5243490 | 17207.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
