Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma 54 modulation protein /ssu ribosomal protein s30p | SAMN05444679_12141 | Not Available | Positive | 5205707 - 5206036 | 12745.2 |
| pts iia-like nitrogen-regulatory protein ptsn | SAMN05444679_12142 | Not Available | Positive | 5206130 - 5206597 | 16405.0 |
| hpr(ser) kinase/phosphatase | SAMN05444679_12143 | Not Available | Positive | 5206626 - 5207585 | 35507.3 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05444679_12144 | Not Available | Negative | 5207689 - 5208108 | 15878.0 |
| beta-barrel assembly machine subunit bame | SAMN05444679_12145 | Not Available | Positive | 5208204 - 5208758 | 20536.5 |
| dihydrodipicolinate reductase | SAMN05444679_12146 | Not Available | Positive | 5208811 - 5209653 | 29172.1 |
| biopolymer transport protein exbb | SAMN05444679_12147 | Not Available | Positive | 5209650 - 5210348 | 24305.8 |
| biopolymer transport protein tolr | SAMN05444679_12148 | Not Available | Positive | 5210365 - 5210826 | 15874.3 |
| leucyl-trna synthetase | SAMN05444679_12149 | Not Available | Positive | 5210892 - 5213555 | 99252.6 |
| lps-assembly lipoprotein | SAMN05444679_12150 | Not Available | Positive | 5213552 - 5214088 | 19740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
