Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05444679_12131 | Not Available | Negative | 5194885 - 5195370 | 17691.1 |
| protein of unknown function | SAMN05444679_12132 | Not Available | Negative | 5195371 - 5195808 | 16055.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444679_12133 | Not Available | Negative | 5195805 - 5196569 | 29228.8 |
| nad(p) transhydrogenase subunit alpha | SAMN05444679_12134 | Not Available | Positive | 5196726 - 5197841 | 38443.7 |
| nad(p) transhydrogenase subunit alpha | SAMN05444679_12135 | Not Available | Positive | 5197855 - 5198184 | 11377.4 |
| nad(p) transhydrogenase subunit beta | SAMN05444679_12136 | Not Available | Positive | 5198181 - 5199605 | 49873.0 |
| long-chain acyl-coa synthetase | SAMN05444679_12137 | Not Available | Positive | 5199697 - 5201373 | 60420.4 |
| adenosylhomocysteine nucleosidase | SAMN05444679_12138 | Not Available | Positive | 5201385 - 5202158 | 26821.3 |
| magnesium transporter | SAMN05444679_12139 | Not Available | Negative | 5202151 - 5203137 | 37871.4 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05444679_12140 | Not Available | Positive | 5203348 - 5205459 | 77413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
