Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_12121 | Not Available | Negative | 5183952 - 5184671 | 26776.7 |
| hypothetical protein | SAMN05444679_12122 | Not Available | Negative | 5184727 - 5184870 | 5182.24 |
| hypothetical protein | SAMN05444679_12123 | Not Available | Negative | 5185030 - 5185182 | 5375.52 |
| excinuclease abc subunit a | SAMN05444679_12124 | Not Available | Negative | 5185199 - 5188357 | 115626.0 |
| single-strand binding protein | SAMN05444679_12125 | Not Available | Positive | 5188380 - 5188892 | 18430.4 |
| conserved repeat domain-containing protein | SAMN05444679_12126 | Not Available | Positive | 5189467 - 5189940 | 15759.8 |
| luciferase family oxidoreductase, group 1 | SAMN05444679_12127 | Not Available | Positive | 5190061 - 5191041 | 35655.7 |
| acyltransferase, ws/dgat/mgat | SAMN05444679_12128 | Not Available | Negative | 5191050 - 5192630 | 55606.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12129 | Not Available | Negative | 5192645 - 5193658 | 35642.2 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05444679_12130 | Not Available | Positive | 5193779 - 5194888 | 40358.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
