Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12111 | Not Available | Positive | 5175455 - 5176429 | 34624.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12112 | Not Available | Positive | 5176488 - 5177450 | 33552.0 |
| fad dependent oxidoreductase | SAMN05444679_12113 | Not Available | Positive | 5177447 - 5178793 | 47808.2 |
| acyl-coa thioesterase-2 | SAMN05444679_12114 | Not Available | Positive | 5178848 - 5179765 | 33404.9 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05444679_12115 | Not Available | Negative | 5179769 - 5180818 | 37726.6 |
| hypothetical protein | SAMN05444679_12116 | Not Available | Positive | 5180915 - 5182237 | 47881.7 |
| f-type h+-transporting atpase subunit c | SAMN05444679_12117 | Not Available | Negative | 5182247 - 5182489 | 8270.28 |
| protein of unknown function | SAMN05444679_12118 | Not Available | Negative | 5182621 - 5182887 | 10002.6 |
| hypothetical protein | SAMN05444679_12119 | Not Available | Negative | 5182862 - 5183128 | 9711.48 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_12120 | Not Available | Negative | 5183178 - 5183867 | 25079.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
