Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetase | SAMN05444679_1211 | Not Available | Positive | 5161820 - 5162415 | 21066.8 |
| response regulator receiver domain-containing protein | SAMN05444679_1212 | Not Available | Positive | 5162509 - 5162871 | 12722.2 |
| hypothetical protein | SAMN05444679_1213 | Not Available | Positive | 5162868 - 5163551 | 24344.6 |
| signal transduction histidine kinase | SAMN05444679_1214 | Not Available | Negative | 5163488 - 5165740 | 81752.4 |
| signal transduction histidine kinase | SAMN05444679_1215 | Not Available | Negative | 5165731 - 5170704 | 177777.0 |
| acyl-coa hydrolase | SAMN05444679_1216 | Not Available | Negative | 5170821 - 5171270 | 15962.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_1217 | Not Available | Negative | 5171316 - 5172230 | 33776.8 |
| gentisate 1,2-dioxygenase | SAMN05444679_1218 | Not Available | Positive | 5172352 - 5173422 | 39410.8 |
| fumarylpyruvate hydrolase | SAMN05444679_1219 | Not Available | Positive | 5173489 - 5174193 | 25451.4 |
| 3-hydroxybenzoate 6-hydroxylase | SAMN05444679_12110 | Not Available | Positive | 5174190 - 5175410 | 44068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
