Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN05444679_10213 | Not Available | Positive | 485570 - 486376 | 28627.5 |
| l-lactate dehydrogenase (cytochrome) | SAMN05444679_10214 | Not Available | Positive | 486469 - 487683 | 43695.4 |
| hypothetical protein | SAMN05444679_10215 | Not Available | Positive | 487882 - 488109 | 8133.76 |
| hypothetical protein | SAMN05444679_10216 | Not Available | Positive | 488251 - 488364 | 4080.94 |
| rio kinase 1 | SAMN05444679_10217 | Not Available | Positive | 488361 - 489215 | 31327.5 |
| hypothetical protein | SAMN05444679_10218 | Not Available | Negative | 489424 - 489660 | 8429.8 |
| hypothetical protein | SAMN05444679_10219 | Not Available | Negative | 489999 - 490229 | 8479.21 |
| catalase-peroxidase | SAMN05444679_10220 | Not Available | Negative | 490517 - 492700 | 80171.8 |
| hypothetical protein | SAMN05444679_10221 | Not Available | Negative | 492887 - 493639 | 26826.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_10222 | Not Available | Negative | 493724 - 494644 | 33539.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
