Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein-disulfide isomerase | SAMN05444679_120158 | Not Available | Positive | 5155110 - 5155766 | 23602.2 |
| hypothetical protein | SAMN05444679_120159 | Not Available | Positive | 5155809 - 5156426 | 21624.7 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05444679_120160 | Not Available | Negative | 5156536 - 5156934 | 14561.6 |
| hypothetical protein | SAMN05444679_120161 | Not Available | Negative | 5157072 - 5157470 | 15022.8 |
| arac-type dna-binding protein | SAMN05444679_120162 | Not Available | Negative | 5157497 - 5158342 | 30971.1 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_120163 | Not Available | Negative | 5158372 - 5159076 | 25265.8 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_120164 | Not Available | Negative | 5159069 - 5159827 | 27255.2 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_120165 | Not Available | Negative | 5159824 - 5160795 | 34707.7 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_120166 | Not Available | Negative | 5160795 - 5161667 | 31020.5 |
| hypothetical protein | SAMN05444679_120167 | Not Available | Negative | 5161685 - 5161819 | 5079.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
