Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | SAMN05444679_120148 | Not Available | Positive | 5142022 - 5143911 | 68448.1 |
| rna polymerase, sigma 70 subunit, rpod | SAMN05444679_120149 | Not Available | Positive | 5144192 - 5146501 | 85535.6 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05444679_120150 | Not Available | Positive | 5146602 - 5147840 | 44569.4 |
| cbs domain-containing membrane protein | SAMN05444679_120151 | Not Available | Positive | 5147846 - 5148976 | 41509.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_120152 | Not Available | Negative | 5148982 - 5149959 | 33424.7 |
| formyl-coa transferase | SAMN05444679_120153 | Not Available | Negative | 5149990 - 5151144 | 41641.9 |
| hydroxymethylglutaryl-coa lyase | SAMN05444679_120154 | Not Available | Negative | 5151158 - 5152108 | 33362.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_120155 | Not Available | Positive | 5152227 - 5153150 | 33412.3 |
| transcriptional regulator, lysr family | SAMN05444679_120156 | Not Available | Negative | 5153134 - 5154063 | 33746.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_120157 | Not Available | Positive | 5154164 - 5155054 | 31844.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
