Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase | SAMN05444679_120138 | Not Available | Negative | 5133494 - 5134480 | 35208.6 |
| transporter, uit6 family | SAMN05444679_120139 | Not Available | Negative | 5134483 - 5135871 | 49230.0 |
| nicotinate phosphoribosyltransferase | SAMN05444679_120140 | Not Available | Negative | 5135892 - 5137121 | 47073.9 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05444679_120141 | Not Available | Positive | 5137309 - 5137542 | 9077.58 |
| hypothetical protein | SAMN05444679_120142 | Not Available | Positive | 5137571 - 5137987 | 15089.1 |
| acyl-coa thioester hydrolase | SAMN05444679_120143 | Not Available | Negative | 5138048 - 5138485 | 15956.9 |
| acetoin utilization deacetylase acuc | SAMN05444679_120144 | Not Available | Negative | 5138482 - 5139480 | 36796.7 |
| phasin family protein | SAMN05444679_120145 | Not Available | Positive | 5139609 - 5140166 | 19059.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_120146 | Not Available | Positive | 5140272 - 5141030 | 25862.5 |
| yihy family inner membrane protein | SAMN05444679_120147 | Not Available | Negative | 5140978 - 5141931 | 34613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
