Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_120128 | Not Available | Positive | 5122940 - 5123884 | 34910.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444679_120129 | Not Available | Negative | 5123976 - 5124857 | 31301.3 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN05444679_120130 | Not Available | Negative | 5124854 - 5125420 | 20996.6 |
| excinuclease abc subunit c | SAMN05444679_120131 | Not Available | Negative | 5125465 - 5127426 | 72177.6 |
| conserved hypothetical protein, pp_1857 family | SAMN05444679_120132 | Not Available | Positive | 5127444 - 5128514 | 39261.9 |
| translation elongation factor p (ef-p) | SAMN05444679_120133 | Not Available | Positive | 5128653 - 5129207 | 20774.9 |
| enoyl-coa hydratase | SAMN05444679_120134 | Not Available | Positive | 5129269 - 5130045 | 27098.6 |
| hypothetical protein | SAMN05444679_120135 | Not Available | Positive | 5130087 - 5130953 | 32122.5 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_120136 | Not Available | Negative | 5130941 - 5132122 | 40946.5 |
| dna recombination protein rmuc | SAMN05444679_120137 | Not Available | Negative | 5132136 - 5133488 | 49891.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
