Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05444679_120118 | Not Available | Negative | 5115021 - 5115794 | 27106.3 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05444679_120119 | Not Available | Negative | 5115796 - 5116560 | 27230.4 |
| nadph2:quinone reductase | SAMN05444679_120120 | Not Available | Positive | 5116687 - 5117673 | 34362.0 |
| nucleoid protein h-ns | SAMN05444679_120121 | Not Available | Negative | 5117740 - 5118078 | 12309.7 |
| Trna-his | Not Available | Not Available | Positive | 5118198 - 5118273 | Not Available |
| peptidyl-prolyl cis-trans isomerase d | SAMN05444679_120123 | Not Available | Negative | 5118304 - 5120217 | 69207.0 |
| Trna-val | Not Available | Not Available | Positive | 5120292 - 5120367 | Not Available |
| bacterial nucleoid protein hbs | SAMN05444679_120125 | Not Available | Negative | 5120385 - 5120657 | 9458.64 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05444679_120126 | Not Available | Negative | 5120886 - 5121971 | 39262.0 |
| haloacetate dehalogenase | SAMN05444679_120127 | Not Available | Negative | 5121975 - 5122865 | 32846.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
