Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit f | SAMN05444679_12098 | Not Available | Negative | 5096628 - 5098205 | 56182.3 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN05444679_12099 | Not Available | Negative | 5098285 - 5098857 | 21000.8 |
| bacterioferritin | SAMN05444679_120100 | Not Available | Positive | 5099097 - 5099573 | 18066.6 |
| hypothetical protein | SAMN05444679_120101 | Not Available | Positive | 5099680 - 5100324 | 23902.8 |
| hypothetical protein | SAMN05444679_120102 | Not Available | Positive | 5100345 - 5100866 | 19044.8 |
| uncharacterized conserved protein, contains gh25 family domain | SAMN05444679_120103 | Not Available | Positive | 5100902 - 5101708 | 28741.3 |
| thiamine biosynthesis lipoprotein | SAMN05444679_120104 | Not Available | Positive | 5101834 - 5102736 | 31546.2 |
| sulfite reductase (nadph) flavoprotein alpha-component | SAMN05444679_120105 | Not Available | Positive | 5102733 - 5104094 | 48753.5 |
| catecholate siderophore receptor | SAMN05444679_120106 | Not Available | Positive | 5104321 - 5106609 | 81360.2 |
| pkhd-type hydroxylase | SAMN05444679_120107 | Not Available | Positive | 5106695 - 5107375 | 25505.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
