Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | SAMN05444679_12088 | Not Available | Negative | 5087824 - 5089230 | 51329.5 |
| lsu ribosomal protein l9p | SAMN05444679_12089 | Not Available | Negative | 5089418 - 5089870 | 15992.2 |
| small subunit ribosomal protein s18 | SAMN05444679_12090 | Not Available | Negative | 5089884 - 5090165 | 11040.5 |
| restart primosome assembly protein prib | SAMN05444679_12091 | Not Available | Negative | 5090187 - 5090489 | 10647.9 |
| ssu ribosomal protein s6p | SAMN05444679_12092 | Not Available | Negative | 5090494 - 5090868 | 14216.1 |
| hypothetical protein | SAMN05444679_12093 | Not Available | Negative | 5090990 - 5091526 | 18554.2 |
| phosphoenolpyruvate synthase | SAMN05444679_12094 | Not Available | Negative | 5091736 - 5094129 | 86589.5 |
| hypothetical protein | SAMN05444679_12095 | Not Available | Positive | 5094324 - 5095145 | 30980.3 |
| transcriptional regulator, marr family | SAMN05444679_12096 | Not Available | Positive | 5095208 - 5095660 | 15979.3 |
| fusaric acid resistance protein-like | SAMN05444679_12097 | Not Available | Positive | 5095657 - 5096676 | 34940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
